MLOC_7890 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.8227 | 20.1485 | 20.1704 | 20.5986 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 26.4797 | 53.1445 | 70.9977 | 45.5432 |
| INF1 | Young developing inflorescences (5mm) | 0.100304 | 0.196811 | 0.0509424 | 0.118299 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.111476 | 0.0173738 | 0.52891 | 0.199047 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 56.278 | 54.9282 | 29.151 | 67.3295 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.396066 | 0.423987 | 0.910163 | 1.77058 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.95111 | 1.24961 | 1.00867 | 1.43276 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.4271 | 10.3556 | 8.31109 | 24.4362 |
CDS Structure of MLOC_7890
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7890.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g33680.1 |
+1 |
0.0 |
842 |
409/494 (83%) |
13109.m03354 protein Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed |
| TAIR PP10 |
AT1G02850.2 |
+1 |
7e-171 |
502 |
255/475 (54%) |
| Symbols: BGLU11 | beta glucosidase 11 | chr1:630569-633085 FORWARD LENGTH=497 |
