- Predicted Gene MLOC_78880
MLOC_78880 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0711563 | 0 | 0.125816 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.8766 | 6.86934 | 6.69786 | 7.33492 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0844959 | 0.449197 | 0.630139 | 0.873921 |
CDS Structure of MLOC_78880
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78880.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g15710.1 |
+1 |
3e-41 |
139 |
70/121 (58%) |
13102.m01752 protein plastocyanin-like domain containing protein, putative |
TAIR PP10 |
AT2G02850.1 |
+1 |
6e-29 |
107 |
48/99 (48%) |
| Symbols: ARPN | plantacyanin | chr2:826630-827720 REVERSE LENGTH=129 |