MLOC_78867 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains301.255365.225342.647384.493
LEAShoots from the seedlings (10 cm shoot stage)366.892180.374181.24232.759
INF1Young developing inflorescences (5mm)738.551692.902748.501693.46
INF2Developing inflorescences (1-1.5 cm)1174.39931.7021158.141285.03
ROORoots from the seedlings (10 cm shoot stage)416.181338.222399.935511.717
NODDeveloping tillers at six leaf stage, 3rd internode214.035206.03687.1789735.739
CAR5Developing grain, bracts removed (5 DPA)628.59516.451390.393564.233
CAR15Developing grain, bracts removed (15 DPA)163.204153.193176.567404.531



CDS Structure of MLOC_78867






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_78867.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360096NoneNoneNoneNone
MLOC_78867.1CUST_6711_PI427708080AvailableAvailablecontig_82267 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g47760.1 +2 0.0 1136 604/649 (93%) 13111.m04765 protein DnaK family protein, putative, expressed
TAIR PP10 AT5G02500.1 +2 0.0 1120 596/651 (92%) | Symbols: HSC70-1, HSP70-1, AT-HSC70-1, HSC70 | heat shock cognate protein 70-1 | chr5:554055-556334 REVERSE LENGTH=651