- Predicted Gene MLOC_78844
MLOC_78844 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.37493 | 9.67177 | 10.3292 | 9.91649 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.55086 | 3.7834 | 4.64593 | 4.52391 |
| INF1 | Young developing inflorescences (5mm) | 35.8773 | 36.0508 | 42.2979 | 34.6575 |
| INF2 | Developing inflorescences (1-1.5 cm) | 66.9855 | 50.5064 | 60.4021 | 67.568 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.61319 | 8.47705 | 14.9353 | 10.1168 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.23982 | 7.3559 | 11.5258 | 19.592 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.97486 | 6.44088 | 8.19614 | 7.16631 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 13.4867 | 11.0511 | 14.739 | 33.4068 |
CDS Structure of MLOC_78844
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78844.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g29470.1 |
+1 |
2e-46 |
159 |
88/114 (77%) |
13103.m03388 protein transcription initiation factor IID, putative, expressed |
| TAIR PP10 |
AT1G54140.1 |
+1 |
1e-31 |
117 |
57/83 (69%) |
| Symbols: TAFII21, TAF9 | TATA binding protein associated factor 21kDa subunit | chr1:20214076-20214869 REVERSE LENGTH=183 |