- Predicted Gene MLOC_78835
MLOC_78835 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 92.2057 | 57.8922 | 61.1429 | 57.0027 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 40.2238 | 26.7055 | 44.3954 | 27.0685 |
INF1 | Young developing inflorescences (5mm) | 57.267 | 70.0148 | 64.8499 | 42.4257 |
INF2 | Developing inflorescences (1-1.5 cm) | 43.5985 | 47.4861 | 43.0167 | 41.2143 |
ROO | Roots from the seedlings (10 cm shoot stage) | 59.3821 | 59.909 | 52.0573 | 55.9949 |
NOD | Developing tillers at six leaf stage, 3rd internode | 44.3241 | 35.8731 | 41.7451 | 102.449 |
CAR5 | Developing grain, bracts removed (5 DPA) | 50.7244 | 56.1348 | 54.2258 | 41.902 |
CAR15 | Developing grain, bracts removed (15 DPA) | 16.307 | 15.3947 | 15.9242 | 28.6898 |
CDS Structure of MLOC_78835
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78835.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g21970.1 |
+2 |
2e-63 |
206 |
105/105 (100%) |
13102.m02462 protein 26S protease regulatory subunit 6B, putative, expressed |
TAIR PP10 |
AT5G58290.1 |
+2 |
8e-64 |
206 |
105/105 (100%) |
| Symbols: RPT3 | regulatory particle triple-A ATPase 3 | chr5:23569155-23571116 FORWARD LENGTH=408 |