MLOC_78810 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains42.366430.793834.266328.0083
LEAShoots from the seedlings (10 cm shoot stage)35.335526.042132.834822.0687
INF1Young developing inflorescences (5mm)40.256445.598860.390130.5166
INF2Developing inflorescences (1-1.5 cm)57.452951.947751.476648.0108
ROORoots from the seedlings (10 cm shoot stage)27.932835.676929.670830.7632
NODDeveloping tillers at six leaf stage, 3rd internode29.549241.917936.8857107.467
CAR5Developing grain, bracts removed (5 DPA)40.254240.358437.990330.247
CAR15Developing grain, bracts removed (15 DPA)26.964127.733228.236850.1469



CDS Structure of MLOC_78810






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK360084
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360084CUST_24291_PI427708080NoneNoneNone
MLOC_26120.1NoneAvailableNonecontig_1736973 (Not mapped)
MLOC_26276.1NoneAvailableNonecontig_174584 (Mapped)
MLOC_28175.1NoneAvailableNonecontig_1897748 (Not mapped)
MLOC_44466.1NoneAvailableNonecontig_27478 (Not mapped)
MLOC_46687.1NoneAvailableNonecontig_29425 (Mapped)
MLOC_48283.1NoneAvailableNonecontig_320622 (Not mapped)
MLOC_53046.1NoneAvailableNonecontig_380162 (Mapped)
MLOC_54800.1NoneAvailableNonecontig_394111 (Not mapped)
MLOC_78810.2NoneAvailableAvailablecontig_8200 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----