MLOC_7881 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.113668 | 0.0675367 | 0.0935005 | 0.0968104 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0546866 | 0 | 0.0563639 | 0.0550399 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0.0349641 | 0.0332727 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.483986 | 0.415476 | 0 | 0.804703 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.421242 | 0.603576 | 0.700936 | 0.695755 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 52.2967 | 52.6575 | 54.6373 | 141.718 |
CDS Structure of MLOC_7881
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_7881.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g32070.1 |
+3 |
4e-104 |
317 |
170/324 (52%) |
13104.m03068 protein dehydrogenase/reductase, putative, expressed |
| TAIR PP10 |
AT5G50700.1 |
+3 |
9e-118 |
350 |
169/325 (52%) |
| Symbols: HSD1 | hydroxysteroid dehydrogenase 1 | chr5:20623259-20624995 REVERSE LENGTH=349 |
