- Predicted Gene MLOC_78806
MLOC_78806 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_78806_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_78806_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 612.752 | 472.673 | 413.421 | 486.021 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 244.243 | 104.095 | 128.88 | 133.564 |
INF1 | Young developing inflorescences (5mm) | 801.625 | 803.081 | 819.712 | 688.199 |
INF2 | Developing inflorescences (1-1.5 cm) | 616.294 | 573.713 | 629.906 | 664.504 |
ROO | Roots from the seedlings (10 cm shoot stage) | 391.455 | 446.53 | 509.243 | 520.157 |
NOD | Developing tillers at six leaf stage, 3rd internode | 30.9715 | 33.3041 | 73.5159 | 130.348 |
CAR5 | Developing grain, bracts removed (5 DPA) | 266.691 | 287.37 | 276.804 | 277.949 |
CAR15 | Developing grain, bracts removed (15 DPA) | 85.4552 | 75.9309 | 76.4682 | 184.696 |
CDS Structure of MLOC_78806
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78806.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g60400.1 |
-1 |
2e-98 |
289 |
142/142 (100%) |
13103.m06626 protein 40S ribosomal protein S23, putative, expressed |
TAIR PP10 |
AT5G02960.1 |
-1 |
1e-93 |
276 |
136/142 (96%) |
Ribosomal protein S12/S23 family protein | chr5:693280-694396 REVERSE LENGTH=142 |