MLOC_78727 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.392022.802954.323270
LEAShoots from the seedlings (10 cm shoot stage)8.734788.3485112.00820
INF1Young developing inflorescences (5mm)4.79486.528978.07080
INF2Developing inflorescences (1-1.5 cm)6.896916.193955.987880
ROORoots from the seedlings (10 cm shoot stage)2.080162.3788100
NODDeveloping tillers at six leaf stage, 3rd internode7.7033717.232517.36490
CAR5Developing grain, bracts removed (5 DPA)2.772864.473373.35750
CAR15Developing grain, bracts removed (15 DPA)0.6025180.6233960.9032670



CDS Structure of MLOC_78727






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251184.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251184.1CUST_23413_PI427708080NoneNoneNone
MLOC_1300.1NoneAvailableAvailablecontig_111387 (Not mapped)
MLOC_28030.1NoneAvailableNonecontig_188432 (Mapped)
MLOC_28228.1NoneAvailableNonecontig_1901873 (Mapped)
MLOC_30501.1NoneAvailableNonecontig_210339 (Not mapped)
MLOC_74947.1NoneAvailableNonecontig_668236 (Not mapped)
MLOC_78727.1NoneAvailableNonecontig_816537 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----