MLOC_78725 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains43.122632.552538.157135.5956
LEAShoots from the seedlings (10 cm shoot stage)62.84576.9806716.223722.9667
INF1Young developing inflorescences (5mm)0.4377470.4168080.2185950.322983
INF2Developing inflorescences (1-1.5 cm)0.3235530.1782770.5707660.379008
ROORoots from the seedlings (10 cm shoot stage)38.531829.637733.741933.1284
NODDeveloping tillers at six leaf stage, 3rd internode134.74495.126734.6158198.833
CAR5Developing grain, bracts removed (5 DPA)5.644286.581326.345766.36302
CAR15Developing grain, bracts removed (15 DPA)0.09344720.1790360.08047680.346873



CDS Structure of MLOC_78725






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_78725.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357812NoneNoneNoneNone
MLOC_78725.2CUST_18476_PI427708080AvailableAvailablecontig_79418 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g14160.1 -1 3e-158 460 254/300 (85%) 13102.m01578 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G05340.1 -1 1e-115 350 193/293 (66%) Peroxidase superfamily protein | chr5:1579142-1580819 REVERSE LENGTH=324