- Predicted Gene MLOC_78666
MLOC_78666 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_78666_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_78666_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.575363 | 0.349895 | 0.173009 | 0.36897 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.202902 | 0.161351 | 0.149303 | 0.145283 |
INF1 | Young developing inflorescences (5mm) | 0.438672 | 0.709606 | 0.64798 | 0.575951 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.520492 | 0.63989 | 0.415285 | 0.667644 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.615168 | 0.509149 | 0.469091 | 0.628244 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.049901 | 0.102433 | 0.298022 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.366839 | 0.461099 | 0.287652 | 0.421621 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.136906 | 0 | 0.0490429 | 0.269268 |
CDS Structure of MLOC_78666
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78666.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g58300.1 |
-2 |
5e-93 |
282 |
169/255 (66%) |
13102.m06753 protein expressed protein |
TAIR PP10 |
AT1G55890.1 |
-2 |
3e-12 |
68 |
60/242 (25%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:20901364-20902560 FORWARD LENGTH=398 |