- Predicted Gene MLOC_78661
MLOC_78661 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.85843 | 3.80487 | 4.62671 | 4.79751 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.91985 | 3.12998 | 3.39908 | 2.82491 |
| INF1 | Young developing inflorescences (5mm) | 7.70064 | 8.49212 | 7.08937 | 7.00382 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.41447 | 7.18291 | 8.46926 | 9.30273 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.04979 | 5.04803 | 4.02207 | 6.66656 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.518603 | 0.944085 | 1.57281 | 3.95372 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.72449 | 7.42669 | 7.17947 | 7.63687 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.45108 | 2.00583 | 2.43461 | 5.66492 |
CDS Structure of MLOC_78661
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78661.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g57630.3 |
-3 |
6e-150 |
443 |
228/371 (61%) |
13101.m06117 protein pentatricopeptide containing protein, putative, expressed |
| TAIR PP10 |
AT3G13160.1 |
-3 |
9e-57 |
198 |
114/334 (34%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:4229994-4231178 REVERSE LENGTH=394 |