- Predicted Gene MLOC_78616
MLOC_78616 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_78616_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_78616_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 74.5548 | 31.8549 | 32.4195 | 38.9528 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 21.9163 | 4.14556 | 5.97485 | 8.86284 |
INF1 | Young developing inflorescences (5mm) | 79.1392 | 100.131 | 108.29 | 71.4352 |
INF2 | Developing inflorescences (1-1.5 cm) | 63.6061 | 81.6919 | 69.5876 | 75.6861 |
ROO | Roots from the seedlings (10 cm shoot stage) | 42.5819 | 24.5005 | 28.2674 | 29.8564 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.556659 | 0.523799 | 0.302489 | 1.48886 |
CAR5 | Developing grain, bracts removed (5 DPA) | 18.0747 | 20.7627 | 20.3106 | 18.3939 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.54018 | 0.834722 | 1.35287 | 2.74951 |
CDS Structure of MLOC_78616
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78616.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g49860.1 |
-1 |
2e-23 |
92 |
47/47 (100%) |
13105.m05340 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
TAIR PP10 |
AT5G22880.1 |
-1 |
2e-22 |
89 |
44/47 (94%) |
| Symbols: H2B, HTB2 | histone B2 | chr5:7652130-7652567 REVERSE LENGTH=145 |