MLOC_78548 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)3.237733.5413800
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)8.757651.3750700
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode03.02280.5414650
CAR5Developing grain, bracts removed (5 DPA)1.927051.670052.001330
CAR15Developing grain, bracts removed (15 DPA)1.89417000



CDS Structure of MLOC_78548






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK376380
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376380NoneNoneNoneNone
MLOC_28528.1NoneAvailableNonecontig_192721 (Mapped)
MLOC_29520.1NoneAvailableNonecontig_201300 (Not mapped)
MLOC_30794.1NoneAvailableNonecontig_212713 (Not mapped)
MLOC_50771.2NoneAvailableAvailablecontig_366139 (Not mapped)
MLOC_78548.1NoneAvailableNonecontig_808803 (Not mapped)
MLOC_8617.2NoneAvailableNonecontig_144809 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----