MLOC_78514 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.022320.086929.0780
LEAShoots from the seedlings (10 cm shoot stage)18.229523.693525.2680
INF1Young developing inflorescences (5mm)32.902138.234241.15070
INF2Developing inflorescences (1-1.5 cm)36.135435.653425.40380
ROORoots from the seedlings (10 cm shoot stage)14.05811.441514.09880
NODDeveloping tillers at six leaf stage, 3rd internode13.63518.161818.37160
CAR5Developing grain, bracts removed (5 DPA)20.212117.317819.1750
CAR15Developing grain, bracts removed (15 DPA)15.679710.996713.63640



CDS Structure of MLOC_78514






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251104.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251104.1CUST_18949_PI427708080NoneNoneNone
MLOC_17797.1NoneAvailableNonecontig_1578086 (Mapped)
MLOC_27332.1NoneAvailableNonecontig_1823075 (Mapped)
MLOC_29898.1NoneAvailableNonecontig_204773 (Mapped)
MLOC_30057.1NoneAvailableNonecontig_2060671 (Mapped)
MLOC_32270.1NoneAvailableNonecontig_227033 (Not mapped)
MLOC_32287.1NoneAvailableNonecontig_227167 (Mapped)
MLOC_35059.1NoneAvailableNonecontig_2454544 (Mapped)
MLOC_41307.1NoneAvailableNonecontig_2582023 (Not mapped)
MLOC_48366.1NoneAvailableNonecontig_322239 (Not mapped)
MLOC_52104.1NoneAvailableNonecontig_372875 (Not mapped)
MLOC_52810.1NoneAvailableNonecontig_378121 (Mapped)
MLOC_66548.1NoneAvailableAvailablecontig_51741 (Mapped)
MLOC_76557.1NoneAvailableNonecontig_718451 (Not mapped)
MLOC_78514.1NoneAvailableNonecontig_806502 (Not mapped)
MLOC_78671.1NoneAvailableNonecontig_813667 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----