MLOC_78492 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.0795216.292715.95414.8479
LEAShoots from the seedlings (10 cm shoot stage)15.155811.83686.9291510.0708
INF1Young developing inflorescences (5mm)28.427225.304127.022924.2548
INF2Developing inflorescences (1-1.5 cm)35.144838.949531.161841.1425
ROORoots from the seedlings (10 cm shoot stage)9.3111513.59778.2295316.1364
NODDeveloping tillers at six leaf stage, 3rd internode9.520268.605947.6423831.1055
CAR5Developing grain, bracts removed (5 DPA)28.086725.282828.292427.6623
CAR15Developing grain, bracts removed (15 DPA)12.478314.601712.626531.8896



CDS Structure of MLOC_78492






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362277
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362277CUST_24516_PI427708080NoneNoneNone
MLOC_37628.1NoneAvailableNonecontig_2548753 (Mapped)
MLOC_38760.1NoneAvailableNonecontig_2551294 (Mapped)
MLOC_78492.1NoneAvailableAvailablecontig_8053 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----