- Predicted Gene MLOC_78452
MLOC_78452 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 18.2103 | 16.7839 | 14.5764 | 21.4551 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0177656 | 0.020003 | 0.0420217 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.6742 | 16.1336 | 7.99631 | 20.7771 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.0178538 | 0 | 0.0284368 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.119342 | 0.0504637 | 0.217554 | 0.324604 |
CDS Structure of MLOC_78452
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78452.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g20284.1 |
-3 |
0.0 |
690 |
330/446 (74%) |
13109.m01920 protein amine oxidase, flavin-containing, domain containing protein, expressed |
TAIR PP10 |
AT5G13700.1 |
-3 |
2e-147 |
441 |
223/458 (49%) |
| Symbols: ATPAO1, APAO, PAO1 | polyamine oxidase 1 | chr5:4420222-4422974 REVERSE LENGTH=472 |