MLOC_78440 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.332927.988797.057436.56862
LEAShoots from the seedlings (10 cm shoot stage)57.85106.12457.146350.6656
INF1Young developing inflorescences (5mm)2.543942.300410.8056261.50908
INF2Developing inflorescences (1-1.5 cm)1.217630.6978740.3160060.869929
ROORoots from the seedlings (10 cm shoot stage)0.6818230.35005600.76221
NODDeveloping tillers at six leaf stage, 3rd internode15.67612.619588.4186510.8085
CAR5Developing grain, bracts removed (5 DPA)5.33947.827955.836645.59921
CAR15Developing grain, bracts removed (15 DPA)1.934492.069421.432254.01206



CDS Structure of MLOC_78440






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_78440.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_78440.1CUST_7920_PI427708086AvailableAvailablecontig_80252 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----