MLOC_78438 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5814030.6093710.6219280.449305
LEAShoots from the seedlings (10 cm shoot stage)0.8785161.507851.354420.743528
INF1Young developing inflorescences (5mm)1.056520.8762871.113090.610614
INF2Developing inflorescences (1-1.5 cm)0.8400171.277930.9666460.8519
ROORoots from the seedlings (10 cm shoot stage)0.4061050.7145830.7305450.546478
NODDeveloping tillers at six leaf stage, 3rd internode0.8524491.181261.860223.12398
CAR5Developing grain, bracts removed (5 DPA)0.7780521.016840.9303590.622797
CAR15Developing grain, bracts removed (15 DPA)0.5402520.4173670.2930620.798884



CDS Structure of MLOC_78438






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_78438.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_78438.1CUST_6987_PI427708086AvailableAvailablecontig_80246 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----