- Predicted Gene MLOC_78431
MLOC_78431 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_78431_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.77764 | 4.434 | 4.22633 | 3.706 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.41372 | 6.33722 | 6.5919 | 5.38613 |
INF1 | Young developing inflorescences (5mm) | 11.8867 | 10.9698 | 12.9656 | 8.96213 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.1524 | 13.2902 | 12.8083 | 13.307 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.33384 | 3.46221 | 2.94126 | 3.57251 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.54142 | 4.36606 | 3.15583 | 13.8407 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.03719 | 8.20569 | 8.18025 | 7.311 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.75846 | 2.79906 | 2.84625 | 5.56762 |
CDS Structure of MLOC_78431
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78431.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g42750.1 |
-2 |
1e-117 |
372 |
207/279 (74%) |
13107.m04478 protein DDT domain containing protein, putative, expressed |
TAIR PP10 |
AT4G12750.1 |
-2 |
0.0 |
689 |
432/969 (45%) |
Homeodomain-like transcriptional regulator | chr4:7498009-7503920 REVERSE LENGTH=1131 |