- Predicted Gene MLOC_78418
MLOC_78418 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.66191 | 2.32153 | 2.09735 | 2.17303 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.3373 | 13.715 | 15.611 | 8.84689 |
| INF1 | Young developing inflorescences (5mm) | 1.5014 | 1.25759 | 1.11789 | 1.08244 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.04387 | 1.18622 | 1.21365 | 1.22277 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.29593 | 2.2122 | 1.91318 | 2.53722 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.1599 | 6.2481 | 13.4264 | 19.8082 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.12193 | 2.20471 | 1.12775 | 1.74321 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.481027 | 0.185127 | 0.461985 | 0.871147 |
CDS Structure of MLOC_78418
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78418.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g21700.1 |
+1 |
1e-74 |
233 |
109/145 (75%) |
13108.m02237 protein DCL, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT3G46630.1 |
+1 |
4e-56 |
185 |
86/118 (73%) |
Protein of unknown function (DUF3223) | chr3:17181138-17182346 REVERSE LENGTH=207 |