MLOC_78399 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.58096000
LEAShoots from the seedlings (10 cm shoot stage)4.6705610.506424.41420
INF1Young developing inflorescences (5mm)2.52155010.06180
INF2Developing inflorescences (1-1.5 cm)4.479305.93490
ROORoots from the seedlings (10 cm shoot stage)5.76305000
NODDeveloping tillers at six leaf stage, 3rd internode2.202826.8741213.38680
CAR5Developing grain, bracts removed (5 DPA)5.540222.459400
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_78399






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366111
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366111CUST_21235_PI427708080NoneNoneNone
MLOC_10864.1NoneAvailableNonecontig_155995 (Mapped)
MLOC_25248.1NoneAvailableNonecontig_1680006 (Not mapped)
MLOC_2630.1NoneAvailableNonecontig_1234930 (Not mapped)
MLOC_28342.1NoneAvailableNonecontig_190993 (Not mapped)
MLOC_30676.1NoneAvailableNonecontig_2117877 (Not mapped)
MLOC_30856.1NoneAvailableNonecontig_2133488 (Not mapped)
MLOC_40829.1NoneAvailableNonecontig_256529 (Mapped)
MLOC_46423.1NoneAvailableNonecontig_29007 (Not mapped)
MLOC_49059.1NoneAvailableNonecontig_33468 (Not mapped)
MLOC_49267.1NoneAvailableNonecontig_338798 (Mapped)
MLOC_52892.1NoneAvailableNonecontig_378873 (Not mapped)
MLOC_54702.1NoneAvailableNonecontig_393235 (Mapped)
MLOC_70914.1NoneAvailableAvailablecontig_58773 (Mapped)
MLOC_78399.1NoneAvailableNonecontig_800647 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----