MLOC_78371 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.06717540.2286041.087020.480478
LEAShoots from the seedlings (10 cm shoot stage)00.1041540.5407840.208878
INF1Young developing inflorescences (5mm)0.0412616000.0440584
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.288833.436430.9972773.37601
NODDeveloping tillers at six leaf stage, 3rd internode000.03048580.0780732
CAR5Developing grain, bracts removed (5 DPA)000.05130380.124942
CAR15Developing grain, bracts removed (15 DPA)0.03519050.042542900.13486



CDS Structure of MLOC_78371






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_78371.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_78371.1CUST_10452_PI427708083AvailableAvailablecontig_79916 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g37700.2 +1 3e-114 336 164/196 (84%) 13105.m03929 protein periplasmic beta-glucosidase precursor, putative, expressed
TAIR PP10 AT3G47000.1 +1 1e-88 279 130/196 (66%) Glycosyl hydrolase family protein | chr3:17313811-17316539 REVERSE LENGTH=608