- Predicted Gene MLOC_78352
MLOC_78352 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_78352_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_78352_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.98168 | 0.573427 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0.347249 | 0.210324 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.230429 | 0.430471 | 0 | 0.460602 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.25286 | 0.416138 | 0.951528 | 1.48166 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_78352
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78352.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g01994.1 |
+1 |
2e-20 |
82 |
36/48 (75%) |
13105.m00149 protein rab5-interacting protein like, putative, expressed |
TAIR PP10 |
AT5G59410.1 |
+1 |
9e-19 |
77 |
35/48 (73%) |
Rab5-interacting family protein | chr5:23959761-23960730 REVERSE LENGTH=130 |