- Predicted Gene MLOC_78350
MLOC_78350 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 29.8231 | 17.6034 | 17.5027 | 21.6004 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.3947 | 0.552809 | 3.16545 | 3.85124 |
| INF1 | Young developing inflorescences (5mm) | 33.9033 | 44.3495 | 40.6468 | 37.335 |
| INF2 | Developing inflorescences (1-1.5 cm) | 23.407 | 38.3908 | 30.2324 | 37.4013 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.6017 | 12.0117 | 14.7505 | 15.5205 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.434458 | 0.219332 | 0.142451 | 0.650858 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.509 | 20.4544 | 20.6906 | 20.0934 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.616698 | 0.262538 | 0.450832 | 1.14336 |
CDS Structure of MLOC_78350
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78350.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g41900.1 |
+3 |
2e-49 |
162 |
73/80 (91%) |
13104.m04120 protein expressed protein |
| TAIR PP10 |
AT5G16250.1 |
+3 |
4e-23 |
92 |
44/74 (59%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:5310264-5310815 REVERSE LENGTH=183 |