MLOC_78345 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.216616.421314.950116.6067
LEAShoots from the seedlings (10 cm shoot stage)25.40839.109932.744528.3184
INF1Young developing inflorescences (5mm)15.418715.140817.577114.6627
INF2Developing inflorescences (1-1.5 cm)16.365513.550717.094818.1862
ROORoots from the seedlings (10 cm shoot stage)16.927417.336416.96722.1071
NODDeveloping tillers at six leaf stage, 3rd internode17.546516.128323.906255.0469
CAR5Developing grain, bracts removed (5 DPA)22.754723.249124.983225.709
CAR15Developing grain, bracts removed (15 DPA)4.992213.940745.4097312.0639



CDS Structure of MLOC_78345






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK354319
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354319CUST_19354_PI427708080NoneNoneNone
MLOC_28148.1NoneAvailableNonecontig_189545 (Mapped)
MLOC_30289.1NoneAvailableNonecontig_2081103 (Not mapped)
MLOC_35977.1NoneAvailableNonecontig_2528662 (Not mapped)
MLOC_41749.1NoneAvailableNonecontig_2604127 (Not mapped)
MLOC_49768.1NoneAvailableNonecontig_348032 (Mapped)
MLOC_78345.1NoneAvailableAvailablecontig_7977 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----