- Predicted Gene MLOC_78328
MLOC_78328 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 13.2599 | 11.2091 | 12.4826 | 11.8269 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.36008 | 5.77946 | 6.61583 | 5.53901 |
INF1 | Young developing inflorescences (5mm) | 28.6725 | 32.8687 | 40.6342 | 28.9734 |
INF2 | Developing inflorescences (1-1.5 cm) | 44.9651 | 39.1558 | 50.2702 | 46.624 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.6697 | 11.9188 | 17.2352 | 14.0974 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.70128 | 3.61009 | 9.54567 | 13.1628 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.2867 | 13.1949 | 17.7927 | 14.0082 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.0958 | 7.98625 | 12.0517 | 23.3155 |
CDS Structure of MLOC_78328
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78328.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g43580.1 |
+1 |
4e-23 |
72 |
33/61 (54%) |
13112.m04594 protein expressed protein |
TAIR PP10 | None | - | - | - | - | - |