MLOC_78328 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.259911.209112.482611.8269
LEAShoots from the seedlings (10 cm shoot stage)8.360085.779466.615835.53901
INF1Young developing inflorescences (5mm)28.672532.868740.634228.9734
INF2Developing inflorescences (1-1.5 cm)44.965139.155850.270246.624
ROORoots from the seedlings (10 cm shoot stage)14.669711.918817.235214.0974
NODDeveloping tillers at six leaf stage, 3rd internode2.701283.610099.5456713.1628
CAR5Developing grain, bracts removed (5 DPA)14.286713.194917.792714.0082
CAR15Developing grain, bracts removed (15 DPA)10.09587.9862512.051723.3155



CDS Structure of MLOC_78328






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_78328.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_78328.1CUST_10438_PI427708083AvailableAvailablecontig_79712 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g43580.1 +1 4e-23 72 33/61 (54%) 13112.m04594 protein expressed protein
TAIR PP10None-----