- Predicted Gene MLOC_78319
MLOC_78319 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.27908 | 6.29246 | 8.48082 | 5.84195 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.73134 | 4.35088 | 5.26394 | 3.33775 |
| INF1 | Young developing inflorescences (5mm) | 18.7753 | 15.4619 | 15.3045 | 11.0704 |
| INF2 | Developing inflorescences (1-1.5 cm) | 15.8309 | 13.5434 | 10.212 | 12.3041 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.45397 | 4.74452 | 4.91815 | 4.39151 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.28719 | 2.77395 | 2.78735 | 7.19132 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.4531 | 8.56345 | 8.08258 | 6.98726 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.39731 | 1.08012 | 2.09107 | 2.68022 |
CDS Structure of MLOC_78319
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78319.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g08300.2 |
-1 |
2e-24 |
99 |
47/58 (81%) |
13102.m00956 protein RAD23 DNA repair protein, putative, expressed |
| TAIR PP10 |
AT1G79650.3 |
-1 |
4e-20 |
86 |
39/51 (76%) |
| Symbols: RAD23, RAD23B | Rad23 UV excision repair protein family | chr1:29972406-29975132 REVERSE LENGTH=351 |