- Predicted Gene MLOC_78307
MLOC_78307 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0.324763 | 0.248811 | 0.654162 | 0.420445 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.151537 | 0.322181 | 0.0941393 | 0.290022 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.135442 | 0.0284462 | 0.648007 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.86798 | 2.78984 | 2.01768 | 3.07723 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.432163 | 0.525567 | 0.369474 | 1.31765 |
CDS Structure of MLOC_78307
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78307.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g08340.1 |
-1 |
2e-19 |
85 |
46/86 (53%) |
13104.m00751 protein OsSigP3 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed |
TAIR PP10 |
AT3G08980.1 |
-1 |
3e-13 |
67 |
36/79 (46%) |
Peptidase S24/S26A/S26B/S26C family protein | chr3:2741279-2742375 FORWARD LENGTH=154 |