MLOC_78265 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains29.483738.250240.577334.7427
LEAShoots from the seedlings (10 cm shoot stage)69.303562.954762.508154.4907
INF1Young developing inflorescences (5mm)16.54116.646418.276513.5339
INF2Developing inflorescences (1-1.5 cm)14.444916.982916.362216.2773
ROORoots from the seedlings (10 cm shoot stage)22.978829.663428.224332.7602
NODDeveloping tillers at six leaf stage, 3rd internode51.126145.890136.6287148.023
CAR5Developing grain, bracts removed (5 DPA)17.81218.051320.535816.7629
CAR15Developing grain, bracts removed (15 DPA)7.552066.782575.7860914.5226



CDS Structure of MLOC_78265






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_78265.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364188NoneNoneNoneNone
MLOC_78265.1CUST_18475_PI427708080AvailableAvailablecontig_79418 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g30210.2 +1 0.0 651 310/385 (81%) 13102.m03296 protein OsFBK7 - F-box domain and kelch repeat containing protein, expressed
TAIR PP10 AT1G67480.2 +1 6e-136 409 195/338 (58%) Galactose oxidase/kelch repeat superfamily protein | chr1:25277294-25278529 FORWARD LENGTH=376