MLOC_78240 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.08724.660197.62670
LEAShoots from the seedlings (10 cm shoot stage)8.306165.189646.066210
INF1Young developing inflorescences (5mm)26.837719.617521.6370
INF2Developing inflorescences (1-1.5 cm)7.8776411.377216.74520
ROORoots from the seedlings (10 cm shoot stage)21.898314.556710.18020
NODDeveloping tillers at six leaf stage, 3rd internode5.616273.252884.920610
CAR5Developing grain, bracts removed (5 DPA)14.715616.472612.92630
CAR15Developing grain, bracts removed (15 DPA)1.917110.3199011.307820



CDS Structure of MLOC_78240






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK356388
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356388CUST_23901_PI427708080NoneNoneNone
MLOC_20648.1NoneAvailableNonecontig_1591108 (Mapped)
MLOC_36116.1NoneAvailableNonecontig_2536091 (Not mapped)
MLOC_78240.1NoneAvailableNonecontig_7932 (Mapped)
MLOC_78241.2NoneAvailableAvailablecontig_7932 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----