- Predicted Gene MLOC_78236
MLOC_78236 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.6545 | 12.8619 | 16.1364 | 12.8842 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.90825 | 4.6849 | 5.8069 | 4.00409 |
| INF1 | Young developing inflorescences (5mm) | 18.5311 | 19.8729 | 22.7528 | 16.4496 |
| INF2 | Developing inflorescences (1-1.5 cm) | 19.308 | 20.6484 | 18.3798 | 20.4607 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.5294 | 13.1107 | 9.5816 | 13.9016 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.13645 | 6.84239 | 7.63346 | 20.2382 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.65266 | 7.35451 | 6.53329 | 6.88443 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.14856 | 3.06373 | 3.39496 | 7.21928 |
CDS Structure of MLOC_78236
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78236.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g48220.1 |
+2 |
0.0 |
725 |
385/526 (73%) |
13101.m04996 protein protein of unknown function DUF1421 domain containing protein, expressed |
| TAIR PP10 |
AT4G28300.1 |
+2 |
2e-31 |
129 |
131/508 (26%) |
Protein of unknown function (DUF1421) | chr4:14014860-14016823 FORWARD LENGTH=496 |