MLOC_78185 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.894213.339214.460611.7629
LEAShoots from the seedlings (10 cm shoot stage)13.339710.47614.43459.00982
INF1Young developing inflorescences (5mm)9.243511.802511.15436.93066
INF2Developing inflorescences (1-1.5 cm)9.2313211.42939.279899.03054
ROORoots from the seedlings (10 cm shoot stage)11.788511.90629.3068411.0376
NODDeveloping tillers at six leaf stage, 3rd internode19.697219.502717.94752.9881
CAR5Developing grain, bracts removed (5 DPA)7.754989.15019.401626.69742
CAR15Developing grain, bracts removed (15 DPA)3.184653.02933.896425.88362



CDS Structure of MLOC_78185






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_78185.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_78185.1CUST_13316_PI427708083AvailableAvailablecontig_79054 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g04254.2 +1 1e-20 94 44/59 (75%) 13104.m00349 protein sterol 3-beta-glucosyltransferase, putative, expressed
TAIR PP10None-----