MLOC_78180 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.090355.97595.669165.02195
LEAShoots from the seedlings (10 cm shoot stage)11.07796.033175.345396.409
INF1Young developing inflorescences (5mm)17.542715.059314.508612.5115
INF2Developing inflorescences (1-1.5 cm)12.813814.385412.103114.2617
ROORoots from the seedlings (10 cm shoot stage)0.8803572.339251.760182.41309
NODDeveloping tillers at six leaf stage, 3rd internode1.319461.803892.211855.59684
CAR5Developing grain, bracts removed (5 DPA)8.681158.677959.680968.51961
CAR15Developing grain, bracts removed (15 DPA)2.335711.864971.959984.57485



CDS Structure of MLOC_78180






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK375886
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375886CUST_22912_PI427708080NoneNoneNone
MLOC_18033.1NoneAvailableNonecontig_1579003 (Mapped)
MLOC_21880.1NoneAvailableNonecontig_1599807 (Mapped)
MLOC_78180.2NoneAvailableAvailablecontig_79031 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----