- Predicted Gene MLOC_78170
MLOC_78170 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.67226 | 7.46249 | 5.9356 | 6.56541 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.4723 | 8.88525 | 10.1696 | 7.76961 |
| INF1 | Young developing inflorescences (5mm) | 7.22388 | 7.05165 | 6.82458 | 6.53472 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.4544 | 11.1321 | 14.6811 | 14.8987 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.884397 | 1.67544 | 1.88894 | 1.89105 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.59934 | 7.78527 | 8.58567 | 20.4344 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.70279 | 4.75642 | 3.63991 | 4.56158 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0467422 | 0.108823 | 0.272486 | 0.356632 |
CDS Structure of MLOC_78170
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78170.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g35644.1 |
-1 |
2e-80 |
249 |
126/155 (81%) |
13110.m03205 protein expressed protein |
| TAIR PP10 |
AT1G28100.5 |
-1 |
4e-66 |
208 |
103/157 (66%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 27 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:9802120-9803775 FORWARD LENGTH=212 |