- Predicted Gene MLOC_78133
MLOC_78133 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_78133_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_78133_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0.049183 | 0.0433333 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.164527 | 0.184829 | 0 | 0.626131 |
CAR5 | Developing grain, bracts removed (5 DPA) | 29.1373 | 33.5848 | 29.5123 | 35.1543 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0973454 | 0.0573598 | 0.0697264 | 0.217607 |
CDS Structure of MLOC_78133
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_78133.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g04020.1 |
+2 |
2e-104 |
314 |
186/247 (75%) |
13103.m00408 protein expansin precursor, putative, expressed |
TAIR PP10 |
AT3G45970.1 |
+2 |
5e-75 |
237 |
134/248 (54%) |
| Symbols: ATEXLA1, EXPL1, ATEXPL1, ATHEXP BETA 2.1, EXLA1 | expansin-like A1 | chr3:16896238-16897189 FORWARD LENGTH=265 |