MLOC_7813 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains26.59619.9372111.821614.6505
LEAShoots from the seedlings (10 cm shoot stage)6.537062.421993.578083.52874
INF1Young developing inflorescences (5mm)12.120815.78119.025112.8288
INF2Developing inflorescences (1-1.5 cm)10.73759.648826.8200810.3854
ROORoots from the seedlings (10 cm shoot stage)15.8114.278047.360367.51297
NODDeveloping tillers at six leaf stage, 3rd internode2.222294.181054.9102212.0366
CAR5Developing grain, bracts removed (5 DPA)5.410636.456216.830286.21611
CAR15Developing grain, bracts removed (15 DPA)1.03291.373231.695683.03343



CDS Structure of MLOC_7813






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7813.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7813.1CUST_10417_PI427708083AvailableAvailablecontig_140235 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g60400.1 -2 2e-23 93 46/46 (100%) 13103.m06626 protein 40S ribosomal protein S23, putative, expressed
TAIR PP10 AT5G02960.1 -2 9e-24 93 46/46 (100%) Ribosomal protein S12/S23 family protein | chr5:693280-694396 REVERSE LENGTH=142