MLOC_78122 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.58192.599323.723683.28967
LEAShoots from the seedlings (10 cm shoot stage)31.70376.7303917.230115.6531
INF1Young developing inflorescences (5mm)3.484485.938925.782324.30675
INF2Developing inflorescences (1-1.5 cm)2.277941.051410.655141.45494
ROORoots from the seedlings (10 cm shoot stage)5.765091.563922.194212.61893
NODDeveloping tillers at six leaf stage, 3rd internode12.667523.920410.760757.8123
CAR5Developing grain, bracts removed (5 DPA)7.519169.7166810.4458.43014
CAR15Developing grain, bracts removed (15 DPA)0.1492310.1632510.1099640.360041



CDS Structure of MLOC_78122






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_78122.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_78122.1NoneAvailableAvailablecontig_7874 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g48200.1 -2 1e-29 114 54/62 (87%) 13106.m05124 protein glycosyl hydrolases family 16, putative, expressed
TAIR PP10 AT4G25810.1 -2 7e-18 81 33/48 (69%) | Symbols: XTR6, XTH23 | xyloglucan endotransglycosylase 6 | chr4:13128694-13129715 FORWARD LENGTH=286