MLOC_78107 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains400.411224.265273.618403.253
LEAShoots from the seedlings (10 cm shoot stage)142.00614.803638.756776.9444
INF1Young developing inflorescences (5mm)764.619781.007848.126969.354
INF2Developing inflorescences (1-1.5 cm)540.061961.726898.8661267.53
ROORoots from the seedlings (10 cm shoot stage)209.636253.374304.24464.269
NODDeveloping tillers at six leaf stage, 3rd internode7.926439.917685.5705633.8093
CAR5Developing grain, bracts removed (5 DPA)265.111251.608244.186386.798
CAR15Developing grain, bracts removed (15 DPA)33.273731.666330.3187109.248



CDS Structure of MLOC_78107






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251817.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251817.1CUST_23475_PI427708080NoneNoneNone
MLOC_78107.1NoneAvailableAvailablecontig_787051 (Not mapped)
MLOC_8041.1NoneAvailableNonecontig_140968 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----