MLOC_78084 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.25443.46594.072574.55856
LEAShoots from the seedlings (10 cm shoot stage)188.926462.189294.548341.925
INF1Young developing inflorescences (5mm)3.381684.064734.323834.25421
INF2Developing inflorescences (1-1.5 cm)4.661984.407974.527456.38125
ROORoots from the seedlings (10 cm shoot stage)3.94052.869533.403744.9794
NODDeveloping tillers at six leaf stage, 3rd internode29.077520.746231.15885.4509
CAR5Developing grain, bracts removed (5 DPA)17.4618.908819.425324.9758
CAR15Developing grain, bracts removed (15 DPA)2.923224.564134.1607312.1716



CDS Structure of MLOC_78084






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373820
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373820CUST_22567_PI427708080NoneNoneNone
MLOC_26563.1NoneAvailableNonecontig_1764240 (Not mapped)
MLOC_29461.1NoneAvailableNonecontig_200815 (Not mapped)
MLOC_32584.1NoneAvailableNonecontig_229953 (Not mapped)
MLOC_50921.1NoneAvailableNonecontig_367683 (Not mapped)
MLOC_78084.2NoneAvailableAvailablecontig_78586 (Mapped)
MLOC_81497.1NoneAvailableNonecontig_96604 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----