MLOC_78026 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.24913.743115.984918.5159
LEAShoots from the seedlings (10 cm shoot stage)8.0034.363925.550575.35917
INF1Young developing inflorescences (5mm)5.374548.511639.448088.51497
INF2Developing inflorescences (1-1.5 cm)10.393613.089612.371516.397
ROORoots from the seedlings (10 cm shoot stage)25.275717.702223.697327.876
NODDeveloping tillers at six leaf stage, 3rd internode45.322142.238427.7221117.426
CAR5Developing grain, bracts removed (5 DPA)2.190843.015362.998553.58849
CAR15Developing grain, bracts removed (15 DPA)0.4691440.2978350.3206241.08465



CDS Structure of MLOC_78026






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_78026.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375865NoneNoneNoneNone
MLOC_78026.2CUST_6670_PI427708080AvailableAvailablecontig_78317 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g33880.1 +3 2e-15 73 41/74 (55%) 13106.m03499 protein expressed protein
TAIR PP10None-----