MLOC_780 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains37.498136.899340.804837.6714
LEAShoots from the seedlings (10 cm shoot stage)22.175571.131159.386240.2767
INF1Young developing inflorescences (5mm)10.392310.559413.74879.84405
INF2Developing inflorescences (1-1.5 cm)10.434411.32679.2904712.2266
ROORoots from the seedlings (10 cm shoot stage)35.015839.202227.524643.8824
NODDeveloping tillers at six leaf stage, 3rd internode27.472236.761733.9964124.074
CAR5Developing grain, bracts removed (5 DPA)16.083216.342412.533716.3808
CAR15Developing grain, bracts removed (15 DPA)4.58065.463214.1498611.037



CDS Structure of MLOC_780






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_780.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_780.1CUST_13309_PI427708083AvailableAvailablecontig_1059674 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g42980.2 -3 3e-20 85 43/44 (98%) 13112.m04534 protein cysteine synthase, putative, expressed
TAIR PP10 AT3G59760.3 -3 5e-18 79 36/44 (82%) | Symbols: OASC, ATCS-C | O-acetylserine (thiol) lyase isoform C | chr3:22072668-22075345 REVERSE LENGTH=430