MLOC_77974 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.179872.789583.350563.1616
LEAShoots from the seedlings (10 cm shoot stage)4.184452.084193.237512.53861
INF1Young developing inflorescences (5mm)2.168032.46452.703422.04032
INF2Developing inflorescences (1-1.5 cm)1.536431.30992.119441.72546
ROORoots from the seedlings (10 cm shoot stage)8.130454.961415.462455.85206
NODDeveloping tillers at six leaf stage, 3rd internode8.462057.9151616.616626.1305
CAR5Developing grain, bracts removed (5 DPA)1.804291.983421.641241.74171
CAR15Developing grain, bracts removed (15 DPA)0.4264330.2707950.2576160.800692



CDS Structure of MLOC_77974






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77974.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_77974.1CUST_10397_PI427708083AvailableAvailablecontig_78142 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48630.2 -2 5e-102 341 217/384 (57%) 13107.m05212 protein ethylene-insensitive 3, putative, expressed
TAIR PP10 AT2G27050.1 -2 4e-52 196 137/381 (36%) | Symbols: EIL1, AtEIL1 | ETHYLENE-INSENSITIVE3-like 1 | chr2:11546314-11548068 FORWARD LENGTH=584