MLOC_77951 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.73967.32518.681798.96492
LEAShoots from the seedlings (10 cm shoot stage)5.812315.654437.70225.52304
INF1Young developing inflorescences (5mm)1.694192.280182.431621.86863
INF2Developing inflorescences (1-1.5 cm)1.414752.024141.619051.90512
ROORoots from the seedlings (10 cm shoot stage)13.724911.183710.065513.6837
NODDeveloping tillers at six leaf stage, 3rd internode13.761417.708719.552856.2007
CAR5Developing grain, bracts removed (5 DPA)2.207423.883662.621942.89656
CAR15Developing grain, bracts removed (15 DPA)1.552231.478291.573293.75079



CDS Structure of MLOC_77951






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77951.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_77951.3CUST_13307_PI427708083AvailableAvailablecontig_78035 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g73580.1 -1 2e-28 119 57/81 (70%) 13101.m08029 protein glycosyl hydrolases, putative, expressed
TAIR PP10 AT3G13784.1 -1 3e-15 78 40/70 (57%) | Symbols: AtcwINV5, CWINV5 | cell wall invertase 5 | chr3:4528529-4530669 REVERSE LENGTH=569