MLOC_77918 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.710885.875286.509674.78003
LEAShoots from the seedlings (10 cm shoot stage)10.33917.605897.392476.8341
INF1Young developing inflorescences (5mm)11.0412.222112.79698.6676
INF2Developing inflorescences (1-1.5 cm)17.44217.237719.518117.4059
ROORoots from the seedlings (10 cm shoot stage)2.867455.382774.905025.34985
NODDeveloping tillers at six leaf stage, 3rd internode4.303675.715247.431218.4698
CAR5Developing grain, bracts removed (5 DPA)10.277810.4410.06628.86145
CAR15Developing grain, bracts removed (15 DPA)2.848332.443062.780635.30338



CDS Structure of MLOC_77918






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77918.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_77918.2CUST_16464_PI427708080AvailableAvailablecontig_77911 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g36640.1 -1 0.0 646 378/710 (53%) 13101.m03710 protein disease resistance protein RPM1, putative, expressed
TAIR PP10 AT3G07040.1 -1 1e-84 295 236/733 (32%) | Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926