MLOC_77896 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.52824.523925.342324.4659
LEAShoots from the seedlings (10 cm shoot stage)33.585427.895428.925223.9984
INF1Young developing inflorescences (5mm)9.648469.6113810.47568.26887
INF2Developing inflorescences (1-1.5 cm)9.332789.7511610.331810.6155
ROORoots from the seedlings (10 cm shoot stage)30.005431.808126.214334.1757
NODDeveloping tillers at six leaf stage, 3rd internode66.297671.867253.4721199.949
CAR5Developing grain, bracts removed (5 DPA)12.427411.111310.570310.957
CAR15Developing grain, bracts removed (15 DPA)5.424796.138664.9303213.4395



CDS Structure of MLOC_77896






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77896.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365390NoneNoneNoneNone
MLOC_77896.2CUST_18471_PI427708080AvailableAvailablecontig_76856 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g46820.1 -1 0.0 581 361/433 (83%) 13106.m04950 protein solute carrier family 35 member F5, putative, expressed
TAIR PP10 AT3G07080.1 -1 1e-121 375 255/407 (63%) EamA-like transporter family | chr3:2241360-2242934 FORWARD LENGTH=438