- Predicted Gene MLOC_77860
MLOC_77860 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.356 | 12.7108 | 12.5536 | 14.2207 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 39.3608 | 45.5646 | 60.7005 | 39.7157 |
| INF1 | Young developing inflorescences (5mm) | 8.48788 | 7.74443 | 7.87586 | 7.22355 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.4668 | 4.74728 | 4.56772 | 4.95134 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.56353 | 3.69144 | 3.64116 | 4.13685 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 13.4905 | 16.1115 | 19.3308 | 46.7959 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.9696 | 11.8217 | 10.478 | 11.4925 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.70678 | 1.05086 | 0.87279 | 2.36244 |
CDS Structure of MLOC_77860
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_77860.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g43070.1 |
+3 |
4e-132 |
390 |
193/250 (77%) |
13101.m04440 protein psbP-related thylakoid lumenal protein 4, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT5G11450.1 |
+3 |
2e-108 |
327 |
160/255 (63%) |
Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein | chr5:3654475-3656357 FORWARD LENGTH=297 |