MLOC_77844 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.894395.209755.851184.58128
LEAShoots from the seedlings (10 cm shoot stage)3.680180.8896022.423761.83307
INF1Young developing inflorescences (5mm)6.155534.991925.452923.92025
INF2Developing inflorescences (1-1.5 cm)5.406354.562255.730734.70206
ROORoots from the seedlings (10 cm shoot stage)2.76485.1371516.03765.41097
NODDeveloping tillers at six leaf stage, 3rd internode00.07207330.03705770.265327
CAR5Developing grain, bracts removed (5 DPA)3.411414.188583.789632.9816
CAR15Developing grain, bracts removed (15 DPA)2.141911.680351.43413.42407



CDS Structure of MLOC_77844






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_77844.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_77844.1CUST_13300_PI427708083AvailableAvailablecontig_77534 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g48310.2 +1 3e-21 90 41/44 (93%) 13105.m05133 protein 60S ribosomal protein L35a-3, putative, expressed
TAIR PP10 AT1G74270.1 +1 6e-18 80 35/43 (81%) Ribosomal protein L35Ae family protein | chr1:27928415-27929466 REVERSE LENGTH=112