- Predicted Gene MLOC_77840
MLOC_77840 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1421.51 | 1122.54 | 1201.18 | 1204.72 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1173.39 | 760.656 | 706.901 | 744.442 |
| INF1 | Young developing inflorescences (5mm) | 1543.85 | 1527.23 | 1743.99 | 1303.44 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1669.69 | 1470.21 | 1793.96 | 1688.55 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1960.66 | 1420.84 | 2060.32 | 1857.79 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 910.351 | 727.027 | 1017.25 | 2449.26 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 696.698 | 759.274 | 678.255 | 678.348 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 384.439 | 350.7 | 359.424 | 821.267 |
CDS Structure of MLOC_77840
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_77840.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g43900.1 |
+3 |
2e-91 |
275 |
140/168 (83%) |
13111.m04379 protein translationally-controlled tumor protein, putative, expressed |
| TAIR PP10 |
AT3G16640.1 |
+3 |
1e-78 |
241 |
126/168 (75%) |
| Symbols: TCTP | translationally controlled tumor protein | chr3:5669709-5670729 REVERSE LENGTH=168 |