MLOC_7782 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.988335.935379.861626.6075
LEAShoots from the seedlings (10 cm shoot stage)4.067543.35818.721823.54679
INF1Young developing inflorescences (5mm)5.493184.011265.07694.10417
INF2Developing inflorescences (1-1.5 cm)2.746683.342025.284454.18
ROORoots from the seedlings (10 cm shoot stage)7.937487.037329.257727.28312
NODDeveloping tillers at six leaf stage, 3rd internode5.149953.978775.001527.45374
CAR5Developing grain, bracts removed (5 DPA)3.409912.405826.875124.28513
CAR15Developing grain, bracts removed (15 DPA)3.501442.052042.505966.32919



CDS Structure of MLOC_7782






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_7782.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_7782.1CUST_10385_PI427708083AvailableAvailablecontig_14012 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g03050.1 +1 3e-28 105 59/78 (76%) 13101.m00252 protein fruit protein PKIWI502, putative, expressed
TAIR PP10None-----